Dyslipidaemia Panel
(includes Familial Hypercholesterolaemia)
Genetic variants have been associated with a variety of cardiac conditions, including cardiac arrhythmias, cardiomyopathies, and dyslipidaemias. Clinical genetic testing is becoming more mainstream in the field of cardiology and has been recommended by several cardiac associations and societies1.
Genetic testing for cardiac conditions can help you, the Healthcare Practitioner, to:
Genseq offer a range of cardiology gene panels (see table below). These are in silico panels based on whole exome sequencing (WES) data. All panels include single nucleotide variants (SNV), small insertions/deletions (indels), and copy number variation (CNV) analysis. Panels marked with an * in the table below also include mitochondrial variant analysis.
For some conditions, we offer a core and an extended panel, giving you flexibility in the scope of analysis required for your patient. The core panels include genes with high or moderate level of evidence for this gene-disease association in the literature. The expanded panels include genes with high, moderate, or low level of evidence for this gene-disease association in the literature. Conditions in which there are two panel options include: Brugada syndrome, Dilated cardiomyopathy (DCM) and conduction defects, Hypertrophic Cardiomyopathy (HCM), and Long QT syndrome (LQTS).
We also offer two comprehensive panels, one for cardiac arrhythmias (43 genes) and the other for cardiomyopathies (122 genes), for cases in which a broader scope of analysis is required.
CAE1016
41
ABL1, ACTA2, ARIH1, ASPH, BGN, CBS, COL1A1, COL1A2, COL3A1, COL5A1, COL5A2, EFEMP2, ELN, FBLN5, FBN1, FBN2, FKBP14, FOXE3, FLNA, IPO8, LOX, LTBP3, MFAP5, MYH11, MYLK, NOTCH1, PMEPA1, PLOD1, PRKG1, SECISBP2, SKI, SLC2A10, SMAD2, SMAD3, SMAD4, SMAD6, TGFB2, TGFB3, TGFBR1, TGFBR2, THSD4
CAE1001
Arrhythmogenic Right Ventricular Cardiomyopathy (ARVC) Panel
14
DH2, CTNNA3, DES, DSC2, DSG2, DSP, FLNC, JUP, LMNA, PKP2, PLN, RYR2, TGFB3, TMEM43
CAE1002
2
KCNH2, SCN5A
CAE1003
Brugada Syndrome -Expanded Panel
13
ANK2, CACNA1C, CACNB2, GPD1L, HCN4, KCND3, KCNE3, KCNH2, SCN1B, SCN2B, SCN3B, SCN5A, TRPM4
CAE1004
Catecholaminergic Polymorphic Ventricular Tachycardia (CPVT) Panel
8
CALM1, CALM2, CALM3, CASQ2, KCNJ2, RYR2, TECRL, TRDN
CAE1005
Comprehensive Cardiac Arrhythmias Panel
43
AKAP9, ANK2, CACNA1C, CACNB2, CALM1, CALM2, CALM3, CASQ2, CAV3, CDH2, CTNNA3, DES, DSC2, DSG2, DSP, FLNC, GPD1L, HCN4, JUP, KCND3, KCNE1, KCNE2, KCNE3, KCNH2, KCNJ2, KCNJ5, KCNQ1, LMNA, PKP2, PLN, RYR2, SCN1B, SCN2B, SCN3B, SCN4B, SCN5A, SLC4A3, SNTA1, TECRL, TGFB3, TMEM43, TRDN, TRPM4
CAE1006
*Comprehensive Cardiomyopathy Panel
122
ABCC9, ACTC1, ACTN2, ALPK3, BAG3, CACNA1C, CAV3, CDH2, COX15, CRYAB, CSRP3, CTNNA3, DES, DMD, DSC2, DSG2, DSP, DTNA, EPG5, EYA4, FHL1, FHOD3, FKTN, FLNC, FXN, GAA, GATAD1, GLA, HAMP, HCN4, HFE, HJV, IDH2, JPH2, JUP, NKX2-5, LAMA4, LAMP2, LDB3, LMNA, MIB1, MT-ATP6, MT-ATP8, MT-CO1, MT-CO2, MT-CO3, MT-CYB, MT-ND1, MT-ND2, MT-ND3, MT-ND4, MT-ND4L, MT-ND5, MT-ND6, MT-RNR1, MT-RNR2, MT-TA, MT-TC, MT-TD, MT-TE, MT-TF, MT-TG, MT-TH, MT-TI, MT-TK, MT-TL1, MT-TL2, MT-TM, MT-TN, MT-TP, MT-TQ, MT-TR, MT-TS1, MT-TS2, MT-TT, MT-TV, MT-TW, MT-TY, MYBPC3, MYH6, MYH7, MYL2, MYL3, MYLK2, MYO6, MYOZ2, MYPN, NEXN, PKP2, PLN, PPCS, PPP1R13L, PRDM16, PRKAG2, PSEN1, PSEN2, PTPN11, RAF1, RBM20, RIT1, RYR2, SCN5A, SDHA, SGCD, SLC25A4, SLC40A1, SPEG, TAFAZZIN, TBX5, TCAP, TFR2, TGFB3, TMEM43, TNNC1, TNNI3, TNNI3K, TNNT2, TPM1, TRIM63, TTN, TTR, VCL
CAE1007
*Dilated Cardiomyopathy (DCM) and Conduction Defects - Core Panel
72
ABCC9, ACTC1, ACTN2, BAG3, CSRP3, DES, DMD, DSP, EPG5, EYA4, HAMP, HFE, HJV, IDH2, LMNA, MT-ATP6, MT-ATP8, MT-CO1, MT-CO2, MT-CO3, MT-CYB, MT-ND1, MT-ND2, MT-ND3, MT-ND4, MT-ND4L, MT-ND5, MT-ND6, MT-RNR1, MT-RNR2, MT-TA, MT-TC, MT-TD, MT-TE, MT-TF, MT-TG, MT-TH, MT-TI, MT-TK, MT-TL1, MT-TL2, MT-TM, MT-TN, MT-TP, MT-TQ, MT-TR, MT-TS1, MT-TS2, MT-TT, MT-TV, MT-TW, MT-TY, MYBPC3, MYH6, MYH7, NEXN, PLN, PPP1R13L, RBM20, SCN5A, SGCD, SLC40A1, SPEG, TAFAZZIN, TCAP, TFR2, TNNC1, TNNI3, TNNT2, TPM1, TTN, VCL
CAE1008
*Dilated Cardiomyopathy (DCM) and Conduction Defects - Expanded Panel
88
ABCC9, ACTC1, ACTN2, BAG3, CRYAB, CSRP3, DES, DMD, DSG2, DSP, EPG5, EYA4, FKTN, FLNC, GATAD1, HAMP, HFE, HJV, IDH2, JPH2, LAMA4, LDB3, LMNA, MT-ATP6, MT-ATP8, MT-CO1, MT-CO2, MT-CO3, MT-CYB, MT-ND1, MT-ND2, MT-ND3, MT-ND4, MT-ND4L, MT-ND5, MT-ND6, MT-RNR1, MT-RNR2, MT-TA, MT-TC, MT-TD, MT-TE, MT-TF, MT-TG, MT-TH, MT-TI, MT-TK, MT-TL1, MT-TL2, MT-TM, MT-TN, MT-TP, MT-TQ, MT-TR, MT-TS1, MT-TS2, MT-TT, MT-TV, MT-TW, MT-TY, MYBPC3, MYH6, MYH7, MYPN, NEXN, PLN, PPCS, PPP1R13L, PRDM16, PSEN1, PSEN2, RAF1, RBM20, SCN5A, SDHA, SGCD, SLC40A1, SPEG, TAFAZZIN, TCAP, TFR2, TNNC1, TNNI3, TNNI3K, TNNT2, TPM1, TTN, VCL
CAE1009
*Dyslipidaemia Panel (includes Familial Hypercholesterolaemia)
20
ABCA1, ABCG5, ABCG8, ALMS1, APOA1, APOA5, APOB, APOC2, APOC3, APOE, CREB3L3, CYP27A1, GPD1, GPIHBP1, LDLR, LDLRAP1, LIPA, LMF1, LPL, PCSK9
CAE1010
*Hypertrophic Cardiomyopathy (HCM) - Core Panel
59
ACTC1, ACTN2, ALPK3, CACNA1C, CSRP3, FHL1, FHOD3, FLNC, GLA, LAMP2, MT-ATP6, MT-ATP8, MT-CO1, MT-CO2, MT-CO3, MT-CYB, MT-ND1, MT-ND2, MT-ND3, MT-ND4, MT-ND4L, MT-ND5, MT-ND6, MT-RNR1, MT-RNR2, MT-TA, MT-TC, MT-TD, MT-TE, MT-TF, MT-TG, MT-TH, MT-TI, MT-TK, MT-TL1, MT-TL2, MT-TM, MT-TN, MT-TP, MT-TQ, MT-T R, MT-TS1, MT-TS2, MT-TT, MT-TV, MT-TW, MT-TY, MYBPC3, MYH7, MYL2, MYL3, PLN, PRKAG2, TNNC1, TNNI3, TNNT2, TPM1, TRIM63, TTR
CAE1011
*Hypertrophic Cardiomyopathy (HCM) - Expanded Panel
82
ABCC9, ACTC1, ACTN2, ALPK3, BAG3, CACNA1C, CAV3, COX15, CRYAB, CSRP3, DES, FHL1, FHOD3, FLNC, FXN, GAA, GLA, JPH2, LAMP2, LDB3, MT-ATP6, MT-ATP8, MT-CO1, MT-CO2, MT-CO3, MT-CYB, MT-ND1, MT-ND2, MT-ND3, MT-ND4, MT-ND4L, MT-ND5, MT-ND6, MT-RNR1, MT-RNR2, MT-TA, MT-TC, MT-TD, MT-TE, MT-TF, MT-TG, MT-TH, MT-TI, MT-TK, MT-TL1, MT-TL2, MT-TM, MT-TN, MT-TP, MT-TQ, MT-TR, MT-TS1, MT-TS2, MT-TT, MT-TV, MT-TW, MT-TY, MYBPC3, MYH6, MYH7, MYL2, MYL3, MYLK2, MYO6, MYOZ2, MYPN, NEXN, PLN, PRKAG2, PTPN11, RAF1, RIT1, SLC25A4, TCAP, TNNC1, TNNI3, TNNT2, TPM1, TRIM63, TTN, TTR, VCL
CAE1012
Left Ventricular Noncompaction Cardiomyopathy (LVNC) Panel
15
ACTC1, DTNA, HCN4, LDB3, MIB1, MYBPC3, MYH7, NKX2-5, PRDM16, RYR2, TAFAZZIN, TBX5, TNNT2, TPM1, TTN
CAE1013
Long QT Syndrome (LQTS) - Core Panel
11
CACNA1C, CALM1, CALM2, CALM3, KCNE1, KCNE2, KCNH2, KCNJ2, KCNQ1, SCN5A, TRDN
CAE1014
Long QT Syndrome (LQTS) - Expanded Panel
17
AKAP9, ANK2, CACNA1C, CALM1, CALM2, CALM3, CAV3, KCNE1, KCNE2, KCNH2, KCNJ2, KCNJ5, KCNQ1, SCN4B, SCN5A, SNTA1, TRDN
CAE1015
Short QT Syndrome (SQTS) Panel
6
CACNA1C, CACNB2, KCNH2, KCNJ2, KCNQ1, SLC4A3
CAE1010b
Transthyretin Amyloidosis (TTR Single Gene Test)
1
TTR
*Panel includes the mitochondrial genome